BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012B08LP1|AL426322
(809 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1793 1553 0.0
>3x_Contig1793
Length = 40499
Score = 1553 bits (781), Expect = 0.0
Identities = 798/805 (99%), Gaps = 1/805 (0%)
Strand = Plus / Minus
Query: 5 ccagtatggcgcaaataaaccaaagaaagccggtacaaacacaacaccaccggaatttgg 64
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 34695 ccagtatggcgcaaataaaccactgaaagccggtacaaacacaacaccaccggaatttgg 34636
Query: 65 tacagctgatgctagaggtccaacatcttcagctcttggaatcaatcttaagttgtctct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34635 tacagctgatgctagaggtccaacatcttcagctcttggaatcaatcttaagttgtctct 34576
Query: 125 tagccactgaactacggcaccagcaacagcaactgaaccttctaaggcataatgtggttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34575 tagccactgaactacggcaccagcaacagcaactgaaccttctaaggcataatgtggttt 34516
Query: 185 accataatcgttttcttcattttctaactgtgggaaccagtatgcaaatgttgttagcgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34515 accataatcgttttcttcattttctaactgtgggaaccagtatgcaaatgttgttagcgc 34456
Query: 245 accgtgctttgatatcaatttagtagttcctgtgttatacaaaaggaaacaacctgtacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34455 accgtgctttgatatcaatttagtagttcctgtgttatacaaaaggaaacaacctgtacc 34396
Query: 305 gtaagtacatttggcagagcctggtttgaatgcaagctgacccaccaaagatgcgctttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34395 gtaagtacatttggcagagcctggtttgaatgcaagctgacccaccaaagatgcgctttg 34336
Query: 365 gtcaccaagacaaccttgtattggcactggaggaactctttgcgaaaatgctgatagaag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34335 gtcaccaagacaaccttgtattggcactggaggaactctttgcgaaaatgctgatagaag 34276
Query: 425 atcccatgctgtggacgtcaaagatttcttggtacattctggaactacaaaattaccgta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34275 atcccatgctgtggacgtcaaagatttcttggtacattctggaactacaaaattaccgta 34216
Query: 485 gtactcagaacttgaaacaatctttggcaaatgaatctttgccttgtcgatgttccaata 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34215 gtactcagaacttgaaacaatctttggcaaatgaatctttgccttgtcgatgttccaata 34156
Query: 545 atcgagcaattcatcgtcgtaatccttagtatttmmmttcatgaaccctgtcctgcaagc 604
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 34155 atcgagcaattcatcgtcgtaatccttagtatttaaattcatgaaccctgtcctgcaagc 34096
Query: 605 attagtgacatcggtaactaamacattgttgtgggtcaaattggcaatcaaccaggtgtc 664
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 34095 attagtgacatcggtaactaaaacattgttgtgggtcaaattggcaatcaaccaggtgtc 34036
Query: 665 gacagtgccgaagaccaaatcattttcttcgtaagctttggtaacttcagggatattatc 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34035 gacagtgccgaagaccaaatcattttcttcgtaagctttggtaacttcagggatattatc 33976
Query: 725 taataaccagcgaagttttggaacaggagaaatatgtagagaacaatggtaatccagtta 784
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33975 taataaccagcgaag-tttggaacaggagaaatatgtagagaacaatggtaatccagtta 33917
Query: 785 attcccttaaatgttcttggtactc 809
|||||||||||||||||||||||||
Sbjct: 33916 attcccttaaatgttcttggtactc 33892
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5983
Number of Sequences: 1807
Number of extensions: 5983
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 809
length of database: 10,358,551
effective HSP length: 16
effective length of query: 793
effective length of database: 10,329,639
effective search space: 8191403727
effective search space used: 8191403727
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)